#!/bin/csh -x

#######################################
cd ~emboss/CURRENT/$1/EMBOSS-0.0.4

mkdir ~emboss/CURRENT/$1/EMBOSS-0.0.4/embassy
cd ~emboss/CURRENT/$1/EMBOSS-0.0.4/embassy

cp ~emboss/CURRENT/OSF/emboss/embassy/mse/MSE*.tar.gz .
cp ~emboss/CURRENT/OSF/emboss/embassy/phylip/PHYLIP*.tar.gz .
cp ~emboss/CURRENT/OSF/emboss/embassy/topo/TOPO*.tar.gz .

gunzip MSE*.tar.gz
tar xvf MSE*
rm -f MSE*.tar

gunzip PHYLIP*.tar.gz
tar xvf PHYLIP*
rm -f PHYLIP*.tar

gunzip TOPO*.tar.gz
tar xvf TOPO*
rm -f TOPO*.tar


foreach t (MSE-0.0.4 PHYLIP-3.573c TOPO-0.1)
    cd $t

    if($1 == "SGI-PURE") then
        setenv CC cc
	./configure --disable-shared --enable-purify
    else
	./configure --disable-shared --enable-debug
    endif

    if ( ! { make } ) then
      echo "Failed $t-build on `hostname` in `pwd`"
      make |& \
      rsh europa fold -w 77 "|"  Mail -s \"$t make failed on $1\" il@sanger.ac.uk
    endif

    cd ..

end