/* * Open BEAGLE * Copyright (C) 2001-2005 by Christian Gagne and Marc Parizeau * * This library is free software; you can redistribute it and/or * modify it under the terms of the GNU Lesser General Public * License as published by the Free Software Foundation; either * version 2.1 of the License, or (at your option) any later version. * * This library is distributed in the hope that it will be useful, * but WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU * Lesser General Public License for more details. * * You should have received a copy of the GNU Lesser General Public * License along with this library; if not, write to the Free Software * Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA * * Contact: * Laboratoire de Vision et Systemes Numeriques * Departement de genie electrique et de genie informatique * Universite Laval, Quebec, Canada, G1K 7P4 * http://vision.gel.ulaval.ca * */ /*! * \file beagle/src/OversizeOp.cpp * \brief Source code of class OversizeOp. * \author Christian Gagne * \author Marc Parizeau * $Revision: 1.10 $ * $Date: 2005/10/04 16:25:10 $ */ #include "beagle/Beagle.hpp" #include #include using namespace std; using namespace Beagle; /*! * \brief Build oversize replacement strategy operator. * \param inOversizeRatioName Oversize ratio parameter name used in the register. * \param inName Name of the oversize operator. */ OversizeOp::OversizeOp(Beagle::string inOversizeRatioName, Beagle::string inName) : ReplacementStrategyOp(inName), mOversizeRatioName(inOversizeRatioName) { } /*! * \brief Initialize the operator. * \param ioSystem Reference to the evolutionary system. */ void OversizeOp::initialize(System& ioSystem) { Beagle_StackTraceBeginM(); ReplacementStrategyOp::initialize(ioSystem); if(ioSystem.getRegister().isRegistered(mOversizeRatioName)) { mOversizeRatio = castHandleT(ioSystem.getRegister().getEntry(mOversizeRatioName)); } else { mOversizeRatio = new Float((float)7.0); Register::Description lDescription( "Oversizing ratio", "Float", "7.0", string("Oversizing ratio, which mean how much bigger is the child population from ") + string("the parent population.") ); ioSystem.getRegister().addEntry(mOversizeRatioName, mOversizeRatio, lDescription); } Beagle_StackTraceEndM("void OversizeOp::initialize(System& ioSystem)"); } /*! * \brief Apply the oversize replacement strategy operation on a deme. * \param ioDeme Reference to the deme on which the operation takes place. * \param ioContext Evolutionary context of the operation. */ void OversizeOp::operate(Deme& ioDeme, Context& ioContext) { Beagle_StackTraceBeginM(); Beagle_NonNullPointerAssertM(getRootNode()); Beagle_ValidateParameterM(mOversizeRatio->getWrappedValue() >= 1.0, mOversizeRatioName, "The oversize ratio must be higher or equal to 1.0."); Beagle_LogTraceM( ioContext.getSystem().getLogger(), "replacement-strategy", "Beagle::OversizeOp", string("Using oversize replacement strategy to process the ")+ uint2ordinal(ioContext.getDemeIndex()+1)+" deme" ); Beagle_LogObjectM( ioContext.getSystem().getLogger(), Logger::eTrace, "replacement-strategy", "Beagle::OversizeOp", (*this) ); RouletteT lRoulette; buildRoulette(lRoulette, ioContext); unsigned int lLambda = (unsigned int)ceil(mOversizeRatio->getWrappedValue()*float(ioDeme.size())); Individual::Bag lOffsprings; for(unsigned int i=0; igetNextSibling(); Beagle_NonNullPointerAssertM(lSelectedBreeder); Beagle_NonNullPointerAssertM(lSelectedBreeder->getBreederOp()); Individual::Handle lBredIndiv = lSelectedBreeder->getBreederOp()->breed(ioDeme, lSelectedBreeder->getFirstChild(), ioContext); Beagle_NonNullPointerAssertM(lBredIndiv); lOffsprings.push_back(lBredIndiv); } ioDeme.insert(ioDeme.end(), lOffsprings.begin(), lOffsprings.end()); Beagle_StackTraceEndM("void OversizeOp::operate(Deme& ioDeme, Context& ioContext)"); } /*! * \brief Read a OversizeOp operator for XML tree. * \param inIter XML iterator to use to read OversizeOp operator. * \param inOpMap Operator map to use to read OversizeOp operator. */ void OversizeOp::readWithMap(PACC::XML::ConstIterator inIter, OperatorMap& inOpMap) { Beagle_StackTraceBeginM(); if((inIter->getType()!=PACC::XML::eData) || (inIter->getValue()!=getName().c_str())) { std::ostringstream lOSS; lOSS << "tag <" << getName() << "> expected!" << std::flush; throw Beagle_IOExceptionNodeM(*inIter, lOSS.str().c_str()); } string lOversizeRatioReadName = inIter->getAttribute("ratio_name").c_str(); if(lOversizeRatioReadName.empty() == false) mOversizeRatioName = lOversizeRatioReadName; ReplacementStrategyOp::readWithMap(inIter, inOpMap); Beagle_StackTraceEndM("void OversizeOp::readWithMap(PACC::XML::ConstIterator inIter, OperatorMap& inOpMap)"); } /*! * \brief Write OversizeOp operator into XML streamer. * \param ioStreamer XML streamer to write OversizeOp operator into. * \param inIndent Whether XML output should be indented. */ void OversizeOp::write(PACC::XML::Streamer& ioStreamer, bool inIndent) const { Beagle_StackTraceBeginM(); ioStreamer.openTag(getName().c_str(), inIndent); ioStreamer.insertAttribute("ratio_name", mOversizeRatioName); if(getRootNode() != NULL) getRootNode()->write(ioStreamer, inIndent); ioStreamer.closeTag(); Beagle_StackTraceEndM("void OversizeOp::write(PACC::XML::Streamer& ioStreamer, bool inIndent) const"); }