#ifndef NODE_ARRAY_H_
#define NODE_ARRAY_H_
#include <graph/Graph.h>
#include <sarray/Range.h>
#include <string>
#include <map>
class SArray;
/**
* A NodeArray is a container class for nodes with a dimension
* attribute. The array can be tiled with nodes using the insert()
* function. Inserted nodes can be retrieved using the find()
* function. Arbitrary subsets of the NodeArray can be returned with
* the getSubSet() function.
*/
class NodeArray {
std::string _name;
Range _range;
Graph _graph;
Node **_node_pointers;
long *_offsets;
std::map<Range, Node *> _generated_nodes;
/* Forbid copying */
NodeArray(NodeArray const &orig);
NodeArray &operator=(NodeArray const &rhs);
bool findActiveIndices(Index &ind, unsigned int k, Index const &lower, Index const &dim) const;
public:
/**
* Constructor. Creates a NodeArray with the given name and dimension
*/
NodeArray(std::string const &name, Index const &dim);
~NodeArray();
/**
* Inserts a node into the subset of the NodeArray defined by range.
* The dimension of the node must conform with the given range.
* The given range must not overlap any previously inserted node.
*
* The node is added to an internal graph.
*
* @exception runtime_error
*/
void insert(Node *node, Range const &range);
/**
* Determines whether the given range is empty of inserted nodes,
* and hence whether it can be used as an argument to insert
*/
bool isEmpty(Range const &range) const;
/**
* Returns a node corresponding to the given range. The range must
* have been used in a previous call to insert, otherwise a NULL
* pointer is returned.
*/
Node* find(Range const &range) const;
/**
* Returns an arbitrary subset of the NodeArray. If the range
* corresponds to a previously inserted node, this will be
* returned. Otherwise, an aggregate node will be created, and it
* will be added to the graph of the NodeArray. If the range is not
* completely covered by inserted nodes, a NULL pointer will be
* returned.
*/
Node* getSubset(Range const &range);
/**
* Sets the values of the nodes in the array.
*
* @param value SArray containing values to be used. The value
* vector of the SArray may contain missing values. If so, then the
* part of the value vector corresponding to each inserted node must be
* either completely missing (in which no action is taken) or
* contain no missing values.
*
* @param observed. Flag indicating whether the nodes are
* considered as observed or not, i.e. whether the values are
* data or simply initial values.
*/
void setValue(SArray const &value, bool observed);
/**
* Gets the values of the stochastic nodes inserted in the array.
*
* @param value SArray to which values should be written.
*
* @param observed. Flag indicating whether to write values of
* observed nodes (i.e. the data) or unobserved nodes (i.e. current
* values of the parameters).
*/
void getValue(SArray &value, bool observed) const;
/**
* Gets the values of all the nodes inserted in the array, irrespective of
* node class or observed status.
*
* @param value SArray to which values should be written.
*/
void getAllValues(SArray &value) const;
/**
* Returns the name of the node array
*/
std::string const &name() const;
/**
* Returns the range of indices covered by the NodeArray
*/
Range const &range() const;
/**
* Returns the graph associated with the NodeArray. This graph
* contains all the nodes that were either used in a call to
* insert, or created during a call to getSubset.
*/
Graph const &graph() const;
/**
* Returns the range corresponding to the given node, if it
* belongs to the graph associated with the NodeArray. If it is
* not in the graph, a NULL Range is returned.
*/
Range getRange(Node const *node) const;
};
#endif /* NODE_ARRAY_H */
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